Published
June 28, 2023 8:52 PM
ShinyMultiome.UiO is an R-based webtool that supports Seurat objects for single-cell Multiome analysis.
Single-Cell Projects
Welcome to Chromatin Biology group Single-Cell Data server. Here users are able to visualize and explore our single-cell datasets.
All scripts are made available in https://github.com/EskelandLab.
Published
Dec. 10, 2022 1:08 PM
We have performed single-cell analysis of untreated and paracetamol treated cells during neuronal differentiation to explore the effect on chromatin opening and gene expression that is available in two webtools. We used our neuronal differentiation protocol and exposed the cells to two therapeutic doses of paracetamol.
Published
Oct. 19, 2022 2:52 PM
We have developed a neuronal differentiation protocol and performed a multiomics study of single-cell RNA-seq and ATAC-seq at four time points: From Human Embryonic Stem Cells (Day 0), and Days 7, 13 and 20 of neuronal differentiation. Here we present two webtools where you can explore these datasets.
Published
Oct. 19, 2022 2:52 PM
We have created ShinyArchR.UiO, an R-based Shiny app, that promotes scATAC-seq data accessibility and visualisation in a user-friendly, interactive, and open-source web interface.